| export CUDA_VISIBLE_DEVICES=7 | |
| python -u moo.py \ | |
| --output_file '/scratch/pranamlab/tong/MOG-DFM/collaboration/FFX.csv' \ | |
| --length 10 \ | |
| --n_batches 600 \ | |
| --weights 1 1 1 4 4 2 \ | |
| --motifs '16-31,62-79' \ | |
| --motif_penalty \ | |
| --target_protein MHVPSGAQLGLRPDLLARRRLKRCPSRWLCLSAAWSFVQVFSEPDGFTVIFSGLGNNAGGTMHWNDTRPAHFRILKVVLREAVAECLMDSYSLDVHGGRRTAAG | |
| # python -u moo.py \ | |
| # --output_file '/scratch/pranamlab/tong/MOG-DFM/collaboration/new_GFAP_365-374.csv' \ | |
| # --length 10 \ | |
| # --weights 1 1 1 1 1 8 8 \ | |
| # --motifs '365-374' \ | |
| # --target_protein MERRRITSAARRSYVSSGEMMVGGLAPGRRLGPGTRLSLARMPPPLPTRVDFSLAGALNAGFKETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRELRLRLDQLTANSARLEVERDNLAQDLATVRQKLQDETNLRLEAENNLAAYRQEADEATLARLDLERKIESLEEEIRFLRKIHEEEVRELQEQLARQQVHVELDVAKPDLTAALKEIRTQYEAMASSNMHEAEEWYRSKFADLTDAAARNAELLRQAKHEANDYRRQLQSLTCDLESLRGTNESLERQMREQEERHVREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEENRITIPVQTFSNLQIRETSLDTKSVSEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM | |
| # python -u moo.py \ | |
| # --output_file '/scratch/pranamlab/tong/MOG-DFM/collaboration/new_GFAP_76-79_365-374.csv' \ | |
| # --length 10 \ | |
| # --weights 1 1 1 1 1 8 8 \ | |
| # --motifs '76-79, 365-374' \ | |
| # --target_protein MERRRITSAARRSYVSSGEMMVGGLAPGRRLGPGTRLSLARMPPPLPTRVDFSLAGALNAGFKETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRELRLRLDQLTANSARLEVERDNLAQDLATVRQKLQDETNLRLEAENNLAAYRQEADEATLARLDLERKIESLEEEIRFLRKIHEEEVRELQEQLARQQVHVELDVAKPDLTAALKEIRTQYEAMASSNMHEAEEWYRSKFADLTDAAARNAELLRQAKHEANDYRRQLQSLTCDLESLRGTNESLERQMREQEERHVREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEENRITIPVQTFSNLQIRETSLDTKSVSEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM | |