Token Classification
Transformers
Safetensors
English
bert
named-entity-recognition
biomedical-nlp
gene-recognition
protein-recognition
genomics
molecular-biology
gene/protein
Instructions to use OpenMed/OpenMed-NER-GenomeDetect-BioPatient-108M with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use OpenMed/OpenMed-NER-GenomeDetect-BioPatient-108M with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("token-classification", model="OpenMed/OpenMed-NER-GenomeDetect-BioPatient-108M")# Load model directly from transformers import AutoTokenizer, AutoModelForTokenClassification tokenizer = AutoTokenizer.from_pretrained("OpenMed/OpenMed-NER-GenomeDetect-BioPatient-108M") model = AutoModelForTokenClassification.from_pretrained("OpenMed/OpenMed-NER-GenomeDetect-BioPatient-108M", device_map="auto") - Notebooks
- Google Colab
- Kaggle
| { | |
| "eval_accuracy": 0.9589946643252736, | |
| "eval_f1": 0.886520684254169, | |
| "eval_loss": 0.37798866629600525, | |
| "eval_precision": 0.8849714881353854, | |
| "eval_recall": 0.8880753138075314 | |
| } |