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+test/data.mdb filter=lfs diff=lfs merge=lfs -text
+train/data.mdb filter=lfs diff=lfs merge=lfs -text
+valid/data.mdb filter=lfs diff=lfs merge=lfs -text

README.md

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 ---
 license: mit
 ---
+# Description
+Binding Site Detection predicts , predict whether a protein residue belongs to a small molecule binding cavity. Binding site residues are those within the binding pocket provided by PDBBind. Default metric is Matthew's Correlation.
+
+# Splits
+
+**Structure type:** PDB
+
+The dataset is from [**ProteinShake Building datasets and benchmarks for deep learning on protein structures**](https://academic.oup.com/bioinformatics/article/33/21/3387/3931857). We use the splits based on 70% structure similarity, with the number of training, validation and test set shown below:
+
+- Train: 2368
+- Valid: 442
+- Test:  464
+
+# Data format
+
+We organize all data in LMDB format. The architecture of the databse is like:
+
+**length:** The number of samples
+
+**0:** 
+
+- **name:** The PDB ID of the protein
+- **seq:** The structure-aware sequence
+- **label:** Classification labels of all residues
+
+**1:**
+
+**···**	
+

test/data.mdb

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train/data.mdb

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valid/data.mdb

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