# /// script # requires-python = ">=3.11" # dependencies = [ # "datasets>=4.0.0", # "huggingface-hub", # "pillow", # "vllm", # "tqdm", # "toolz", # "torch", # ] # # [[tool.uv.index]] # url = "https://wheels.vllm.ai/nightly" # # [tool.uv] # prerelease = "allow" # /// """ Convert document images to markdown using DeepSeek-OCR with vLLM. This script processes images through the DeepSeek-OCR model to extract text and structure as markdown, using vLLM for efficient batch processing. Uses the official vLLM offline pattern: llm.generate() with PIL images and NGramPerReqLogitsProcessor to prevent repetition on complex documents. See: https://docs.vllm.ai/projects/recipes/en/latest/DeepSeek/DeepSeek-OCR.html NOTE: Uses vLLM nightly wheels. First run may take a few minutes to download and install dependencies. Features: - LaTeX equation recognition - Table extraction and formatting - Document structure preservation - Image grounding and descriptions - Multilingual support - Batch processing with vLLM for better performance """ import argparse import io import json import logging import os import sys from datetime import datetime from typing import Any, Dict, Union import torch from datasets import load_dataset from huggingface_hub import DatasetCard, login from PIL import Image from toolz import partition_all from tqdm.auto import tqdm from vllm import LLM, SamplingParams from vllm.model_executor.models.deepseek_ocr import NGramPerReqLogitsProcessor logging.basicConfig(level=logging.INFO) logger = logging.getLogger(__name__) # Prompt mode presets (from DeepSeek-OCR GitHub) PROMPT_MODES = { "document": "\n<|grounding|>Convert the document to markdown.", "image": "\n<|grounding|>OCR this image.", "free": "\nFree OCR.", "figure": "\nParse the figure.", "describe": "\nDescribe this image in detail.", } def check_cuda_availability(): """Check if CUDA is available and exit if not.""" if not torch.cuda.is_available(): logger.error("CUDA is not available. This script requires a GPU.") logger.error("Please run on a machine with a CUDA-capable GPU.") sys.exit(1) else: logger.info(f"CUDA is available. GPU: {torch.cuda.get_device_name(0)}") def to_pil(image: Union[Image.Image, Dict[str, Any], str]) -> Image.Image: """Convert various image formats to PIL Image.""" if isinstance(image, Image.Image): return image elif isinstance(image, dict) and "bytes" in image: return Image.open(io.BytesIO(image["bytes"])) elif isinstance(image, str): return Image.open(image) else: raise ValueError(f"Unsupported image type: {type(image)}") def create_dataset_card( source_dataset: str, model: str, num_samples: int, processing_time: str, batch_size: int, max_model_len: int, max_tokens: int, gpu_memory_utilization: float, image_column: str = "image", split: str = "train", ) -> str: """Create a dataset card documenting the OCR process.""" model_name = model.split("/")[-1] return f"""--- tags: - ocr - document-processing - deepseek - deepseek-ocr - markdown - uv-script - generated --- # Document OCR using {model_name} This dataset contains markdown-formatted OCR results from images in [{source_dataset}](https://huggingface.co/datasets/{source_dataset}) using DeepSeek-OCR. ## Processing Details - **Source Dataset**: [{source_dataset}](https://huggingface.co/datasets/{source_dataset}) - **Model**: [{model}](https://huggingface.co/{model}) - **Number of Samples**: {num_samples:,} - **Processing Time**: {processing_time} - **Processing Date**: {datetime.now().strftime("%Y-%m-%d %H:%M UTC")} ### Configuration - **Image Column**: `{image_column}` - **Output Column**: `markdown` - **Dataset Split**: `{split}` - **Batch Size**: {batch_size} - **Max Model Length**: {max_model_len:,} tokens - **Max Output Tokens**: {max_tokens:,} - **GPU Memory Utilization**: {gpu_memory_utilization:.1%} ## Model Information DeepSeek-OCR is a state-of-the-art document OCR model that excels at: - LaTeX equations - Mathematical formulas preserved in LaTeX format - Tables - Extracted and formatted as HTML/markdown - Document structure - Headers, lists, and formatting maintained - Image grounding - Spatial layout and bounding box information - Complex layouts - Multi-column and hierarchical structures - Multilingual - Supports multiple languages ## Dataset Structure The dataset contains all original columns plus: - `markdown`: The extracted text in markdown format with preserved structure - `inference_info`: JSON list tracking all OCR models applied to this dataset ## Usage ```python from datasets import load_dataset import json # Load the dataset dataset = load_dataset("{{{{output_dataset_id}}}}", split="{split}") # Access the markdown text for example in dataset: print(example["markdown"]) break # View all OCR models applied to this dataset inference_info = json.loads(dataset[0]["inference_info"]) for info in inference_info: print(f"Column: {{{{info['column_name']}}}} - Model: {{{{info['model_id']}}}}") ``` ## Reproduction This dataset was generated using the [uv-scripts/ocr](https://huggingface.co/datasets/uv-scripts/ocr) DeepSeek OCR vLLM script: ```bash uv run https://huggingface.co/datasets/uv-scripts/ocr/raw/main/deepseek-ocr-vllm.py \\\\ {source_dataset} \\\\ \\\\ --image-column {image_column} ``` ## Performance - **Processing Speed**: ~{num_samples / (float(processing_time.split()[0]) * 60):.1f} images/second - **Processing Method**: Batch processing with vLLM (2-3x speedup over sequential) Generated with [UV Scripts](https://huggingface.co/uv-scripts) """ def main( input_dataset: str, output_dataset: str, image_column: str = "image", batch_size: int = 8, model: str = "deepseek-ai/DeepSeek-OCR", max_model_len: int = 8192, max_tokens: int = 8192, gpu_memory_utilization: float = 0.8, prompt_mode: str = "document", prompt: str = None, hf_token: str = None, split: str = "train", max_samples: int = None, private: bool = False, shuffle: bool = False, seed: int = 42, ): """Process images from HF dataset through DeepSeek-OCR model with vLLM.""" # Check CUDA availability first check_cuda_availability() # Track processing start time start_time = datetime.now() # Login to HF if token provided HF_TOKEN = hf_token or os.environ.get("HF_TOKEN") if HF_TOKEN: login(token=HF_TOKEN) # Determine prompt if prompt is not None: final_prompt = prompt logger.info("Using custom prompt") elif prompt_mode in PROMPT_MODES: final_prompt = PROMPT_MODES[prompt_mode] logger.info(f"Using prompt mode: {prompt_mode}") else: raise ValueError( f"Invalid prompt mode '{prompt_mode}'. " f"Use one of {list(PROMPT_MODES.keys())} or specify --prompt" ) logger.info(f"Prompt: {final_prompt}") # Load dataset logger.info(f"Loading dataset: {input_dataset}") dataset = load_dataset(input_dataset, split=split) # Validate image column if image_column not in dataset.column_names: raise ValueError( f"Column '{image_column}' not found. Available: {dataset.column_names}" ) # Shuffle if requested if shuffle: logger.info(f"Shuffling dataset with seed {seed}") dataset = dataset.shuffle(seed=seed) # Limit samples if requested if max_samples: dataset = dataset.select(range(min(max_samples, len(dataset)))) logger.info(f"Limited to {len(dataset)} samples") # Initialize vLLM (matches official DeepSeek-OCR vLLM recipe) logger.info(f"Initializing vLLM with model: {model}") logger.info("This may take a few minutes on first run...") llm = LLM( model=model, trust_remote_code=True, max_model_len=max_model_len, gpu_memory_utilization=gpu_memory_utilization, enable_prefix_caching=False, mm_processor_cache_gb=0, logits_processors=[NGramPerReqLogitsProcessor], ) sampling_params = SamplingParams( temperature=0.0, max_tokens=max_tokens, skip_special_tokens=False, extra_args=dict( ngram_size=30, window_size=90, whitelist_token_ids={128821, 128822}, ), ) logger.info(f"Processing {len(dataset)} images in batches of {batch_size}") # Process images in batches using llm.generate() with PIL images all_markdown = [] for batch_indices in tqdm( partition_all(batch_size, range(len(dataset))), total=(len(dataset) + batch_size - 1) // batch_size, desc="DeepSeek-OCR vLLM processing", ): batch_indices = list(batch_indices) batch_images = [dataset[i][image_column] for i in batch_indices] try: # Build model inputs with PIL images (official vLLM pattern) model_inputs = [] for img in batch_images: pil_img = to_pil(img).convert("RGB") model_inputs.append( {"prompt": final_prompt, "multi_modal_data": {"image": pil_img}} ) # Process with vLLM generate API outputs = llm.generate(model_inputs, sampling_params) # Extract outputs for output in outputs: text = output.outputs[0].text.strip() all_markdown.append(text) except Exception as e: logger.error(f"Error processing batch: {e}") all_markdown.extend(["[OCR FAILED]"] * len(batch_images)) # Calculate processing time processing_duration = datetime.now() - start_time processing_time_str = f"{processing_duration.total_seconds() / 60:.1f} min" # Add markdown column to dataset logger.info("Adding markdown column to dataset") dataset = dataset.add_column("markdown", all_markdown) # Handle inference_info tracking logger.info("Updating inference_info...") # Check for existing inference_info if "inference_info" in dataset.column_names: # Parse existing info from first row (all rows have same info) try: existing_info = json.loads(dataset[0]["inference_info"]) if not isinstance(existing_info, list): existing_info = [existing_info] # Convert old format to list except (json.JSONDecodeError, TypeError): existing_info = [] # Remove old column to update it dataset = dataset.remove_columns(["inference_info"]) else: existing_info = [] # Add new inference info new_info = { "column_name": "markdown", "model_id": model, "processing_date": datetime.now().isoformat(), "prompt": final_prompt, "prompt_mode": prompt_mode if prompt is None else "custom", "batch_size": batch_size, "max_tokens": max_tokens, "gpu_memory_utilization": gpu_memory_utilization, "max_model_len": max_model_len, "script": "deepseek-ocr-vllm.py", "script_version": "2.0.0", "script_url": "https://huggingface.co/datasets/uv-scripts/ocr/raw/main/deepseek-ocr-vllm.py", "implementation": "vllm (batch processing, llm.generate + NGramPerReqLogitsProcessor)", } existing_info.append(new_info) # Add updated inference_info column info_json = json.dumps(existing_info, ensure_ascii=False) dataset = dataset.add_column("inference_info", [info_json] * len(dataset)) # Push to hub logger.info(f"Pushing to {output_dataset}") dataset.push_to_hub(output_dataset, private=private, token=HF_TOKEN) # Create and push dataset card logger.info("Creating dataset card...") card_content = create_dataset_card( source_dataset=input_dataset, model=model, num_samples=len(dataset), processing_time=processing_time_str, batch_size=batch_size, max_model_len=max_model_len, max_tokens=max_tokens, gpu_memory_utilization=gpu_memory_utilization, image_column=image_column, split=split, ) card = DatasetCard(card_content) card.push_to_hub(output_dataset, token=HF_TOKEN) logger.info("✅ Dataset card created and pushed!") logger.info("✅ OCR conversion complete!") logger.info( f"Dataset available at: https://huggingface.co/datasets/{output_dataset}" ) logger.info(f"Processing time: {processing_time_str}") if __name__ == "__main__": # Show example usage if no arguments if len(sys.argv) == 1: print("=" * 80) print("DeepSeek-OCR to Markdown Converter (vLLM)") print("=" * 80) print("\nThis script converts document images to markdown using") print("DeepSeek-OCR with vLLM for efficient batch processing.") print("\nFeatures:") print("- LaTeX equation recognition") print("- Table extraction and formatting") print("- Document structure preservation") print("- Image grounding and spatial layout") print("- Multilingual support") print("- Fast batch processing with vLLM") print("\nExample usage:") print("\n1. Basic OCR conversion (document mode with grounding):") print(" uv run deepseek-ocr-vllm.py document-images markdown-docs") print("\n2. Parse figures from documents:") print( " uv run deepseek-ocr-vllm.py scientific-papers figures --prompt-mode figure" ) print("\n3. Free OCR without layout:") print(" uv run deepseek-ocr-vllm.py images text --prompt-mode free") print("\n4. Process a subset for testing:") print( " uv run deepseek-ocr-vllm.py large-dataset test-output --max-samples 10" ) print("\n5. Running on HF Jobs:") print(" hf jobs uv run --flavor l4x1 \\") print(" -s HF_TOKEN \\") print( " https://huggingface.co/datasets/uv-scripts/ocr/raw/main/deepseek-ocr-vllm.py \\" ) print(" your-document-dataset \\") print(" your-markdown-output") print("\n" + "=" * 80) print("\nFor full help, run: uv run deepseek-ocr-vllm.py --help") sys.exit(0) parser = argparse.ArgumentParser( description="OCR images to markdown using DeepSeek-OCR (vLLM)", formatter_class=argparse.RawDescriptionHelpFormatter, epilog=""" Prompt Modes: document Convert document to markdown with grounding (default) image OCR any image with grounding free Free OCR without layout preservation figure Parse figures from documents describe Generate detailed image descriptions Examples: # Basic usage uv run deepseek-ocr-vllm.py my-images-dataset ocr-results # Parse figures from a document dataset uv run deepseek-ocr-vllm.py scientific-papers figures --prompt-mode figure # Free OCR without layout uv run deepseek-ocr-vllm.py images text --prompt-mode free # Custom prompt for specific task uv run deepseek-ocr-vllm.py dataset output --prompt "\\nExtract all table data." # With custom batch size for performance tuning uv run deepseek-ocr-vllm.py dataset output --batch-size 16 --max-model-len 16384 # Running on HF Jobs hf jobs uv run --flavor l4x1 -s HF_TOKEN \\ https://huggingface.co/datasets/uv-scripts/ocr/raw/main/deepseek-ocr-vllm.py \\ my-dataset my-output --max-samples 10 """, ) parser.add_argument("input_dataset", help="Input dataset ID from Hugging Face Hub") parser.add_argument("output_dataset", help="Output dataset ID for Hugging Face Hub") parser.add_argument( "--image-column", default="image", help="Column containing images (default: image)", ) parser.add_argument( "--batch-size", type=int, default=8, help="Batch size for processing (default: 8, adjust based on GPU memory)", ) parser.add_argument( "--model", default="deepseek-ai/DeepSeek-OCR", help="Model to use (default: deepseek-ai/DeepSeek-OCR)", ) parser.add_argument( "--max-model-len", type=int, default=8192, help="Maximum model context length (default: 8192)", ) parser.add_argument( "--max-tokens", type=int, default=8192, help="Maximum tokens to generate (default: 8192)", ) parser.add_argument( "--gpu-memory-utilization", type=float, default=0.8, help="GPU memory utilization (default: 0.8)", ) parser.add_argument( "--prompt-mode", default="document", choices=list(PROMPT_MODES.keys()), help="Prompt mode preset (default: document). Use --prompt for custom prompts.", ) parser.add_argument( "--prompt", help="Custom OCR prompt (overrides --prompt-mode)", ) parser.add_argument("--hf-token", help="Hugging Face API token") parser.add_argument( "--split", default="train", help="Dataset split to use (default: train)" ) parser.add_argument( "--max-samples", type=int, help="Maximum number of samples to process (for testing)", ) parser.add_argument( "--private", action="store_true", help="Make output dataset private" ) parser.add_argument( "--shuffle", action="store_true", help="Shuffle the dataset before processing (useful for random sampling)", ) parser.add_argument( "--seed", type=int, default=42, help="Random seed for shuffling (default: 42)", ) args = parser.parse_args() main( input_dataset=args.input_dataset, output_dataset=args.output_dataset, image_column=args.image_column, batch_size=args.batch_size, model=args.model, max_model_len=args.max_model_len, max_tokens=args.max_tokens, gpu_memory_utilization=args.gpu_memory_utilization, prompt_mode=args.prompt_mode, prompt=args.prompt, hf_token=args.hf_token, split=args.split, max_samples=args.max_samples, private=args.private, shuffle=args.shuffle, seed=args.seed, )