eloise54 commited on
Commit
0541bcc
·
1 Parent(s): 54ecb32

update documentation

Browse files
Files changed (2) hide show
  1. README.md +28 -0
  2. app.py +30 -0
README.md CHANGED
@@ -59,3 +59,31 @@ On the test set:
59
  * ```F2 Score: 0.7841299670635844```
60
  * ```mAP50 0.8192513111358107```
61
  * ```mAP50-95 0.37744414058421033```
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
59
  * ```F2 Score: 0.7841299670635844```
60
  * ```mAP50 0.8192513111358107```
61
  * ```mAP50-95 0.37744414058421033```
62
+
63
+ ## Dataset overview
64
+
65
+ [![Hugging Face Dataset](https://img.shields.io/badge/huggingface-dataset-blue?logo=huggingface)](https://huggingface.co/datasets/eloise54/cots_yolo_dataset)
66
+
67
+ This dataset is a **modified version** of the [CSIRO COTS and COTS Scars Dataset](https://data.csiro.au/collection/csiro:64235), originally released under the [Creative Commons Attribution 4.0 License (CC BY 4.0)](https://creativecommons.org/licenses/by/4.0/).
68
+
69
+ The original dataset contains images and annotations for **Crown-of-Thorns Starfish (COTS)** and **COTS scars**, collected to support coral reef monitoring and control efforts on the Great Barrier Reef (GBR).
70
+
71
+ These starfish are coral predators, and their outbreaks can severely damage reef ecosystems.
72
+
73
+ >**Please cite the original dataset authors if you use this dataset in your work.**
74
+
75
+
76
+ # 🙏 Citation
77
+
78
+ ```bibtex
79
+ @dataset{csiro_cots_2024,
80
+ author = {Armin, Ali and Bainbridge, Scott and Page, Geoff and Tychsen-Smith, Lachlan and Coleman, Greg and Oorloff, Jeremy and Harvey, De'vereux and Do, Brendan and Marsh, Benjamin and Lawrence, Emma and Kusy, Brano and Hayder, Zeeshan and Bonin, Mary},
81
+ title = {COTS and COTS scar dataset},
82
+ year = {2024},
83
+ publisher = {CSIRO},
84
+ version = {v1},
85
+ doi = {10.25919/03a7-hn83},
86
+ url = {https://data.csiro.au/collection/csiro:64235}
87
+ }
88
+ ```
89
+
app.py CHANGED
@@ -152,6 +152,34 @@ def prev_sample(index: int, dataset_choice: str):
152
  # ---------------------------------
153
  # 5. UI elements
154
  # ---------------------------------
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
155
  with gr.Blocks() as demo:
156
  gr.Markdown("## 🪸 Crown of thorns starfish detection - protect the great barrier reef")
157
  gr.Markdown("Use **Next** or **Previous** to browse samples and see model predictions vs ground truth.")
@@ -173,6 +201,8 @@ with gr.Blocks() as demo:
173
  with gr.Row():
174
  prev_btn = gr.Button("⬅️ Prev image")
175
  next_btn = gr.Button("Next image➡️")
 
 
176
 
177
  # Connect navigation
178
  prev_btn.click(fn=prev_sample, inputs=[state, dropdown], outputs=[image_output, state, index, dataset_choice])
 
152
  # ---------------------------------
153
  # 5. UI elements
154
  # ---------------------------------
155
+
156
+ dataset_information= """
157
+ ## Dataset overview
158
+
159
+ [![Hugging Face Dataset](https://img.shields.io/badge/huggingface-dataset-blue?logo=huggingface)](https://huggingface.co/datasets/eloise54/cots_yolo_dataset)
160
+
161
+ This dataset is a **modified version** of the [CSIRO COTS and COTS Scars Dataset](https://data.csiro.au/collection/csiro:64235), originally released under the [Creative Commons Attribution 4.0 License (CC BY 4.0)](https://creativecommons.org/licenses/by/4.0/).
162
+
163
+ The original dataset contains images and annotations for **Crown-of-Thorns Starfish (COTS)** and **COTS scars**, collected to support coral reef monitoring and control efforts on the Great Barrier Reef (GBR).
164
+
165
+ These starfish are coral predators, and their outbreaks can severely damage reef ecosystems.
166
+
167
+ **PCSIRO COTS and COTS Scars Dataset reference:**
168
+
169
+
170
+ ```bibtex
171
+ @dataset{csiro_cots_2024,
172
+ author = {Armin, Ali and Bainbridge, Scott and Page, Geoff and Tychsen-Smith, Lachlan and Coleman, Greg and Oorloff, Jeremy and Harvey, De'vereux and Do, Brendan and Marsh, Benjamin and Lawrence, Emma and Kusy, Brano and Hayder, Zeeshan and Bonin, Mary},
173
+ title = {COTS and COTS scar dataset},
174
+ year = {2024},
175
+ publisher = {CSIRO},
176
+ version = {v1},
177
+ doi = {10.25919/03a7-hn83},
178
+ url = {https://data.csiro.au/collection/csiro:64235}
179
+ }
180
+ ```
181
+
182
+ """
183
  with gr.Blocks() as demo:
184
  gr.Markdown("## 🪸 Crown of thorns starfish detection - protect the great barrier reef")
185
  gr.Markdown("Use **Next** or **Previous** to browse samples and see model predictions vs ground truth.")
 
201
  with gr.Row():
202
  prev_btn = gr.Button("⬅️ Prev image")
203
  next_btn = gr.Button("Next image➡️")
204
+ with gr.Row():
205
+ gr.Markdown(dataset_information)
206
 
207
  # Connect navigation
208
  prev_btn.click(fn=prev_sample, inputs=[state, dropdown], outputs=[image_output, state, index, dataset_choice])